STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ankrd9Ankyrin repeat domain 9. (337 aa)    
Predicted Functional Partners:
kctd9
Potassium channel tetramerization domain containing 9a.
      
 0.681
eloc
Elongin C paralog a; Belongs to the SKP1 family.
    
 0.666
ibtk
Inhibitor of Bruton agammaglobulinemia tyrosine kinase.
   
 0.655
commd8
COMM domain containing 8.
   
  0.653
rnf7
Ring finger protein 7.
    
  0.650
dnajc17
DnaJ (Hsp40) homolog, subfamily C, member 17.
   
  
 0.650
commd1
Copper metabolism (Murr1) domain containing 1.
    
  0.645
commd4
COMM domain containing 4.
    
 0.643
LOC103469676
Neuropeptide Y receptor Y8b; Belongs to the G-protein coupled receptor 1 family.
    
 0.633
commd9
COMM domain containing 9.
    
  0.631
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.