STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000006176Ig-like domain-containing protein. (161 aa)    
Predicted Functional Partners:
setd4
SET domain containing 4.
      
 0.629
ppp1r11
Protein phosphatase 1, regulatory (inhibitor) subunit 11.
      
 0.629
ENSPREP00000024881
IGv domain-containing protein.
   
  
 0.517
SGCZ
Sarcoglycan zeta.
     
 0.503
sgcd
Sarcoglycan, delta (dystrophin-associated glycoprotein).
     
 0.503
LOC103480654
Uncharacterized protein.
     
 0.503
cinp
Cyclin-dependent kinase 2 interacting protein.
    
   0.497
LOC103471391
Protocadherin 11.
    
 0.490
pcdh9
Protocadherin 9.
    
 0.490
LOC103475843
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
    
 0.488
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.