STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
dcaf17Ddb1 and cul4 associated factor 17. (475 aa)    
Predicted Functional Partners:
dcaf8
DDB1 and CUL4 associated factor 8.
     
 0.894
dcaf13
Ddb1 and cul4 associated factor 13.
     
 0.877
cul4b
Cullin 4B; Belongs to the cullin family.
    
 0.868
cul4a
Cullin 4A; Belongs to the cullin family.
    
 0.868
ddb1
Damage-specific DNA binding protein 1.
    
 0.857
LOC103479147
DET1 and DDB1 associated 1.
    
 0.838
DDA1
DET1 and DDB1 associated 1.
    
 0.838
wdtc1
WD and tetratricopeptide repeats 1.
     
 0.806
dcaf10
WD repeat domain 32.
     
 0.799
dcaf5
Ddb1 and cul4 associated factor 5.
     
  0.797
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.