STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103465720RIC3 domain-containing protein. (344 aa)    
Predicted Functional Partners:
unc50
Unc-50 homolog (C. elegans).
      
 0.649
LOC103467077
Cation-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type V subfamily.
   
 0.556
pla2g6
Phospholipase A2, group VI (cytosolic, calcium-independent).
      
 0.550
spg11
SPG11 vesicle trafficking associated, spatacsin.
      
 0.549
DNAJC13
DnaJ heat shock protein family (Hsp40) member C13.
      
 0.549
synj1
Synaptojanin 1.
      
 0.549
ENSPREP00000020277
RBR-type E3 ubiquitin transferase.
      
 0.549
atxn2
Ataxin 2.
      
 0.549
vps35
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
      
 0.549
pink1
PTEN induced kinase 1.
      
 0.549
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.