Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC103472140Striatin, calmodulin binding protein. (779 aa)    
Predicted Functional Partners:
LOC103481920
MOB family member 4, phocein.
   
 
 0.849
strip1
Striatin interacting protein 1.
   
 
 0.834
strip2
Striatin interacting protein 2.
   
 
 0.828
cttnbp2
Cortactin binding protein 2.
   
 
 0.797
slmap
Sarcolemma associated protein a.
   
 0.786
ppp2r1b
Protein phosphatase 2, regulatory subunit A, beta b.
   
 
 0.785
fgfr1op2
FGFR1 oncogene partner 2.
    
 
 0.781
Suox
Sulfite oxidase.
    
   0.780
LOC103467452
CTTNBP2 N-terminal like b.
   
 
 0.757
pdcd10
Programmed cell death 10b.
    
 
 0.756
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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