STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103458559Cytochrome b reductase 1. (272 aa)    
Predicted Functional Partners:
LOC103464043
Mesoderm induction early response 1, family member 2.
    
   0.904
cdyl
Chromodomain protein, Y-like.
    
   0.780
CDYL2
Chromodomain Y like 2.
    
   0.780
mier1
Mesoderm induction early response 1b, transcriptional regulator.
    
   0.774
mier3
Mesoderm induction early response 1, family member 3 b.
    
   0.774
ENSPREP00000003320
Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily.
      
 0.605
slc40a1
Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily.
      
 0.605
SLC11A2
Solute carrier family 11 member 2.
      
 0.529
LOC103467973
Solute carrier family 11 member 2.
      
 0.529
tmem209
Transmembrane protein 209.
      
 0.492
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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