STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103465962SPARC-like 1. (641 aa)    
Predicted Functional Partners:
lum
Lumican.
   
  
 0.765
ENSPREP00000013903
Uncharacterized protein.
      
 0.681
LOC103459210
Decorin; May affect the rate of fibrils formation.
   
  
 0.653
LOC103474035
Secreted phosphoprotein 1.
      
 0.627
fam20a
FAM20A golgi associated secretory pathway pseudokinase.
     
 0.589
LOC103465969
Uncharacterized protein.
      
 0.553
LOC103465941
Uncharacterized protein.
      
 0.550
Stab1
Link domain-containing protein.
   
 
 0.501
ENSPREP00000028118
Uncharacterized protein.
   
 
 0.501
ENSPREP00000028193
Uncharacterized protein.
   
 
 0.501
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.