STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ctnnal1Catenin (cadherin-associated protein), alpha-like 1. (756 aa)    
Predicted Functional Partners:
sntg1
Syntrophin, gamma 1.
   
 
 0.881
sntb2
Syntrophin, beta 2.
    
 
 0.725
SNTA1
Syntrophin alpha 1.
    
 
 0.725
sntb1
Syntrophin, basic 1.
    
 
 0.725
kcnma1
Potassium calcium-activated channel subfamily M alpha 1.
   
 
 0.674
LOC103476821
Potassium large conductance calcium-activated channel, subfamily M, alpha member 1a.
   
 
 0.674
pik3c3
Phosphatidylinositol 3-kinase catalytic subunit type 3.
      
 0.670
utrn
Uncharacterized protein.
   
 
 0.668
ENSPREP00000005618
Uncharacterized protein.
   
 
 0.668
ENSPREP00000005674
Uncharacterized protein.
   
 
 0.668
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.