STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103464520Retinol binding protein 7b, cellular; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family. (134 aa)    
Predicted Functional Partners:
ube4b
Ubiquitination factor E4B, UFD2 homolog (S. cerevisiae).
 
    
 0.588
rbp4
Retinol binding protein 4, plasma; Belongs to the calycin superfamily. Lipocalin family.
   
 
 0.568
nhlrc2
NHL repeat containing 2.
      
 0.532
h6pd
Hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase).
      
 0.484
lrat
LRAT domain-containing protein.
     
 0.424
LOC103470451
Rho related BTB domain containing 4.
      
 0.407
rhobtb2
Rho related BTB domain containing 2a.
      
 0.407
lrrk1
Uncharacterized protein.
      
 0.405
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.