STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000006296Ion_trans_2 domain-containing protein. (307 aa)    
Predicted Functional Partners:
zmat3
Zinc finger, matrin-type 3.
   
  
 0.614
LRFN2
Leucine rich repeat and fibronectin type III domain containing 2.
    
 
 0.608
txndc12
Thioredoxin domain containing 12 (endoplasmic reticulum).
      
 0.594
fkbpl
FKBP prolyl isomerase like.
      
 0.555
LOC103467472
Nuclear receptor coactivator 6.
      
 0.549
morn5
MORN repeat containing 5.
   
  
 0.535
ENSPREP00000021240
Proline rich 16.
      
 0.526
cog6
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
      
 0.524
kcnv1
BTB domain-containing protein; Belongs to the potassium channel family.
   
  
 0.508
ttll11
Tubulin tyrosine ligase-like family, member 11.
   
  
 0.507
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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