STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
znrf3Zinc and ring finger 3. (891 aa)    
Predicted Functional Partners:
rspo1
R-spondin 1.
    
 0.999
LOC103478337
R-spondin 3.
    
 0.995
rspo2
R-spondin 2.
    
 0.995
lgr4
Leucine-rich repeat containing G protein-coupled receptor 4.
    
 0.990
fzd4
Frizzled class receptor 4; Belongs to the G-protein coupled receptor Fz/Smo family.
    
 0.973
ENSPREP00000033419
R-spondin 4.
    
 0.964
ENSPREP00000005844
Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family.
    
 0.963
LGR5
Leucine rich repeat containing G protein-coupled receptor 5.
    
 0.962
Fzd8
Frizzled class receptor 8a; Belongs to the G-protein coupled receptor Fz/Smo family.
    
 0.957
LOC103479948
Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family.
    
 0.957
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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