STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
rasa1RAS p21 protein activator (GTPase activating protein) 1a. (1049 aa)    
Predicted Functional Partners:
pdgfrb
Platelet-derived growth factor receptor, beta polypeptide; Belongs to the protein kinase superfamily. Tyr protein kinase family.
   
 0.984
kras
V-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog.
   
 0.984
hras
HRas proto-oncogene, GTPase a.
   
 0.984
LOC103480775
Docking protein 1b.
    
 
 0.976
mras
Muscle RAS oncogene homolog.
    
 0.957
LOC103468146
RAS related.
    
 0.953
rras2
RAS related 2.
    
 0.953
ENSPREP00000004218
Docking protein 2.
   
 
 0.932
arhgap5
Rho GTPase activating protein 5.
   
 0.893
LOC103475743
Rho GTPase activating protein 35b.
   
 0.893
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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