STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103480104Si:ch211-212k18.7. (245 aa)    
Predicted Functional Partners:
LOC103474698
Purinergic receptor P2Y12.
      
 0.758
il10
Interleukin 10.
      
 0.758
pxdn
Peroxidasin.
      
 0.751
tyrobp
Uncharacterized protein.
   
  
 0.729
LOC103473739
Transmembrane protein 119b.
      
 0.727
ENSPREP00000024840
TIR domain-containing protein.
   
 
 0.723
AIF1
Allograft inflammatory factor 1.
   
 
 0.721
AXL
AXL receptor tyrosine kinase.
    
 
 0.699
LOC103478364
Si:cabz01093077.1; Belongs to the G-protein coupled receptor 1 family.
   
  
 0.670
LOC103470686
Interleukin-1.
   
  
 0.655
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.