STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
bhlha15Basic helix-loop-helix family, member a15. (248 aa)    
Predicted Functional Partners:
LOC103470872
Ribosomal protein L26.
    
 
 0.579
RPL36A
Ribosomal protein L36a; Belongs to the eukaryotic ribosomal protein eL42 family.
    
   0.536
lman1
Lectin, mannose-binding, 1.
      
 0.503
FADS6
Fatty acid desaturase 6.
      
 0.497
LOC103462749
Uncharacterized protein.
      
 0.462
LOC103457203
Zinc finger, AN1-type domain 3.
      
 0.462
LOC103473625
POU domain protein.
   
  
 0.426
LOC103478402
TYR_PHOSPHATASE_2 domain-containing protein.
      
 0.408
SLC17A6
Solute carrier family 17 member 6b.
   
  
 0.407
tesc
Tescalcin a.
      
 0.406
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.