STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Glod5Glyoxalase domain containing 5. (180 aa)    
Predicted Functional Partners:
taf1b
TATA box binding protein (Tbp)-associated factor, RNA polymerase I, B.
    
 0.782
Mcee
Methylmalonyl CoA epimerase.
   
  
 0.768
LOC103471188
Germ cell nuclear acidic peptidase.
    
 0.697
hpdl
4-hydroxyphenylpyruvate dioxygenase.
      
 0.655
kars1
Lysine--tRNA ligase.
   
 0.596
tmem231
Transmembrane protein 231.
      
 0.595
ogfod1
2-oxoglutarate and iron-dependent oxygenase domain containing 1.
      
 0.591
mrrf
Mitochondrial ribosome recycling factor.
     
 0.589
rrn3
RRN3 homolog, RNA polymerase I transcription factor.
    
 0.573
glrx
Glutaredoxin (thioltransferase).
  
 
  0.545
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.