STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103472121BTB (POZ) domain containing 3a. (410 aa)    
Predicted Functional Partners:
LOC103479391
CULLIN_2 domain-containing protein; Belongs to the cullin family.
   
 0.784
LOC103474461
Cullin 3; Belongs to the cullin family.
   
 0.784
cops2
COP9 signalosome subunit 2.
   
  0.740
cops5
COP9 signalosome subunit 5.
    
  0.735
cops3
COP9 signalosome subunit 3.
    
  0.735
cops4
COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis).
    
  0.694
ENSPREP00000020872
Uncharacterized protein.
    
  0.688
LOC103477227
Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
      
 0.658
COPS6
COP9 signalosome subunit 6.
    
  0.657
tasp1
Taspase, threonine aspartase, 1.
   
  
 0.613
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.