STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
foxa1Fork-head domain-containing protein. (411 aa)    
Predicted Functional Partners:
gata3
GATA binding protein 3.
    
 0.828
esr1
Estrogen receptor; The steroid hormones and their receptors are involved in the regulation of eukaryotic gene expression and affect cellular proliferation and differentiation in target tissues.
    
 0.817
LOC103475709
Androgen receptor.
   
 0.791
ar
Androgen receptor.
   
 0.791
gata6
GATA binding protein 6.
   
 0.753
gata4
GATA binding protein 4.
   
 0.753
mixl1
Mix paired-like homeobox.
   
 
 0.752
LOC103458082
Estrogen receptor 2b.
    
 0.730
LOC103457290
Estrogen receptor 2a.
    
 0.730
GATA2
GATA binding protein 2.
    
 0.727
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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