STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103465717Uncharacterized protein. (355 aa)    
Predicted Functional Partners:
pcyt2
Phosphate cytidylyltransferase 2, ethanolamine.
   
 
 0.977
PCYT2
Phosphate cytidylyltransferase 2, ethanolamine.
   
 
 0.977
LOC103471399
Phosphoethanolamine methyltransferase.
    
 0.934
gpcpd1
Glycerophosphocholine phosphodiesterase 1.
    
 0.904
etnppl
Ethanolamine-phosphate phospho-lyase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
     
 0.901
rptor
Regulatory associated protein of MTOR, complex 1.
    
 0.874
mapkap1
MAPK associated protein 1.
    
 
 0.667
LOC103466273
Choline kinase alpha.
     
 0.613
chkb
Choline kinase beta.
     
 0.613
prkdc
Protein kinase, DNA-activated, catalytic subunit; Belongs to the PI3/PI4-kinase family.
    
 0.610
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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