STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
rwdd4RWD domain containing 4. (236 aa)    
Predicted Functional Partners:
drg2
Developmentally regulated GTP binding protein 2.
   
 0.929
drg1
Developmentally regulated GTP binding protein 1.
   
 0.889
znf330
Zinc finger protein 330.
   
   0.824
gcn1
GCN1 activator of EIF2AK4.
    
 
 0.706
esf1
ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae).
   
   0.662
LOC103475388
Solute carrier family 7 member 3a.
      
 0.599
zc3h15
Zinc finger CCCH-type containing 15.
   
 
 0.576
rwdd1
RWD domain containing 1.
   
  
 0.549
map3k4
Mitogen-activated protein kinase kinase kinase 4.
    
   0.541
ENSPREP00000004394
Jumonji domain containing 7.
     
  0.491
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.