STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
myct1Myc target 1a. (196 aa)    
Predicted Functional Partners:
adgrl4
Adhesion G protein-coupled receptor L4; Belongs to the G-protein coupled receptor 2 family.
   
  
 0.651
plekha5
PH domain-containing protein.
      
 0.576
PLEKHA5
Pleckstrin homology domain containing A5.
      
 0.576
ptprc
Protein tyrosine phosphatase receptor type C.
      
 0.573
ogfod1
2-oxoglutarate and iron-dependent oxygenase domain containing 1.
      
 0.519
plekhj1
Pleckstrin homology domain containing, family J member 1.
      
 0.514
TINAGL1
Tubulointerstitial nephritis antigen like 1; Belongs to the peptidase C1 family.
   
  
 0.512
znf574
Zinc finger protein 526.
      
 0.503
ENSPREP00000012190
G patch domain containing 1.
      
 0.496
DBI
ACB domain-containing protein.
      
 0.463
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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