STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103466912Uncharacterized protein. (467 aa)    
Predicted Functional Partners:
rpap3
RNA polymerase II associated protein 3.
      
 0.640
tm2d2
TM2 domain containing 2.
      
 0.612
ENSPREP00000000019
G-patch domain-containing protein.
      
 0.527
ENSPREP00000024566
Uncharacterized protein.
      
 0.502
LOC103467667
TAFA chemokine like family member 1a.
      
 0.478
ENSPREP00000026970
Uncharacterized protein.
      
 0.478
plekha2
Uncharacterized protein.
      
 0.472
lman1
Lectin, mannose-binding, 1.
      
 0.455
SHKBP1
SH3KBP1 binding protein 1.
      
 0.405
kctd3
Potassium channel tetramerization domain containing 3.
      
 0.405
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.