STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
dlx2Distal-less homeobox 2b. (278 aa)    
Predicted Functional Partners:
dlx5
Distal-less homeobox 5a.
   
 
 0.984
dlx1
Distal-less homeobox 1a.
   
 
 0.870
nes
IF rod domain-containing protein; Belongs to the intermediate filament family.
      
 0.765
ENSPREP00000017324
Homeobox domain-containing protein.
   
 
 0.738
bmp4
Bone morphogenetic protein 4.
     
 0.721
pax9
Paired box 9.
      
 0.663
LOC103478374
Iroquois homeobox 1a.
   
 
 0.637
LOC103472063
Homeobox domain-containing protein.
   
 
 0.637
fgf3
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
     
 0.624
foxg1
Forkhead box G1a.
   
 
 0.614
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.