STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000006402Uncharacterized protein. (79 aa)    
Predicted Functional Partners:
dmap1
DNA methyltransferase 1 associated protein 1.
    
 0.961
ing3
Inhibitor of growth protein.
    
 0.959
LOC103471057
Bromodomain containing 8.
 
   
  0.951
Brd8
Si:ch211-59d17.3.
 
   
  0.951
meaf6
MYST/Esa1-associated factor 6.
    
 0.944
yeats4
YEATS domain containing 4.
    
 0.917
ENSPREP00000007462
Uncharacterized protein.
    
 0.916
vps72
Vacuolar protein sorting 72 homolog a.
    
 0.915
ENSPREP00000022903
Uncharacterized protein.
    
 0.914
Trrap
FATC domain-containing protein; Belongs to the PI3/PI4-kinase family.
    
 0.914
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.