STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
gpbp1l1GC-rich promoter binding protein 1-like 1. (496 aa)    
Predicted Functional Partners:
LOC103463097
Transmembrane protein 69.
      
 0.909
cnot1
CCR4-NOT transcription complex, subunit 1.
   
 
 0.728
TMEM69
Transmembrane protein 69.
      
 0.638
zfyve27
Zinc finger, FYVE domain containing 27.
      
 0.589
cnot11
CCR4-NOT transcription complex, subunit 11.
    
 
 0.576
CNOT2
CCR4-NOT transcription complex subunit 2.
   
 
 0.525
LOC103466190
CCR4-NOT transcription complex, subunit 2.
   
 
 0.525
ranbp9
RAN binding protein 9.
   
  
 0.507
ranbp10
RAN binding protein 10.
   
  
 0.507
LOC103460162
Chondrolectin.
      
 0.478
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.