STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
tmem161bTransmembrane protein 161B. (492 aa)    
Predicted Functional Partners:
pigg
Phosphatidylinositol glycan anchor biosynthesis class G.
      
 0.758
LOC103464606
Kelch repeat and BTB (POZ) domain containing 12.
      
 0.670
tmem117
Transmembrane protein 117.
      
 0.661
cwc22
CWC22 spliceosome associated protein homolog.
      
 0.659
fut11
Alpha-(1,3)-fucosyltransferase; Probable fucosyltransferase; Belongs to the glycosyltransferase 10 family.
      
 0.648
NAALADL2
N-acetylated alpha-linked acidic dipeptidase like 2.
      
 0.648
lpar1
Lysophosphatidic acid receptor 1; Belongs to the G-protein coupled receptor 1 family.
    
 
 0.624
creld1
Cysteine-rich with EGF-like domains 1b.
   
  
 0.622
mecom
MDS1 and EVI1 complex locus.
      
 0.606
gpaa1
Glycosylphosphatidylinositol anchor attachment 1.
      
 0.597
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.