dlgap5 protein (Poecilia reticulata) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

dlgap5

Discs, large (Drosophila) homolog-associated protein 5. (827 aa)

Predicted Functional Partners:

cdc20

0.985

kif11

0.983

LOC103481969

0.979

cep55

0.978

nusap1

0.977

tpx2

0.974

nuf2

0.973

ENSPREP00000023746

0.971

bub1b

0.970

LOC103463131

0.970

Your Current Organism:

Poecilia reticulata

NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPREP00000023746	LOC103463131	ENSPREP00000023746	ENSPREP00000033737	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Abnormal spindle microtubule assembly.	0.970
ENSPREP00000023746	LOC103481969	ENSPREP00000023746	ENSPREP00000029516	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Baculoviral IAP repeat containing 5a.	0.889
ENSPREP00000023746	bub1b	ENSPREP00000023746	ENSPREP00000032059	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	BUB1 mitotic checkpoint serine/threonine kinase Bb.	0.999
ENSPREP00000023746	cdc20	ENSPREP00000023746	ENSPREP00000004130	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Cell division cycle 20 homolog.	0.991
ENSPREP00000023746	cep55	ENSPREP00000023746	ENSPREP00000033526	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Centrosomal protein 55 like.	0.965
ENSPREP00000023746	dlgap5	ENSPREP00000023746	ENSPREP00000006448	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Discs, large (Drosophila) homolog-associated protein 5.	0.971
ENSPREP00000023746	kif11	ENSPREP00000023746	ENSPREP00000017489	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.993
ENSPREP00000023746	nuf2	ENSPREP00000023746	ENSPREP00000030246	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	UF2 component of NDC80 kinetochore complex.	0.989
ENSPREP00000023746	nusap1	ENSPREP00000023746	ENSPREP00000027860	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Nucleolar and spindle associated protein 1.	0.927
ENSPREP00000023746	tpx2	ENSPREP00000023746	ENSPREP00000013076	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	TPX2 microtubule nucleation factor.	0.894
LOC103463131	ENSPREP00000023746	ENSPREP00000033737	ENSPREP00000023746	Abnormal spindle microtubule assembly.	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.970
LOC103463131	LOC103481969	ENSPREP00000033737	ENSPREP00000029516	Abnormal spindle microtubule assembly.	Baculoviral IAP repeat containing 5a.	0.903
LOC103463131	bub1b	ENSPREP00000033737	ENSPREP00000032059	Abnormal spindle microtubule assembly.	BUB1 mitotic checkpoint serine/threonine kinase Bb.	0.971
LOC103463131	cdc20	ENSPREP00000033737	ENSPREP00000004130	Abnormal spindle microtubule assembly.	Cell division cycle 20 homolog.	0.967
LOC103463131	cep55	ENSPREP00000033737	ENSPREP00000033526	Abnormal spindle microtubule assembly.	Centrosomal protein 55 like.	0.943
LOC103463131	dlgap5	ENSPREP00000033737	ENSPREP00000006448	Abnormal spindle microtubule assembly.	Discs, large (Drosophila) homolog-associated protein 5.	0.970
LOC103463131	kif11	ENSPREP00000033737	ENSPREP00000017489	Abnormal spindle microtubule assembly.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.981
LOC103463131	nuf2	ENSPREP00000033737	ENSPREP00000030246	Abnormal spindle microtubule assembly.	UF2 component of NDC80 kinetochore complex.	0.966
LOC103463131	nusap1	ENSPREP00000033737	ENSPREP00000027860	Abnormal spindle microtubule assembly.	Nucleolar and spindle associated protein 1.	0.950
LOC103463131	tpx2	ENSPREP00000033737	ENSPREP00000013076	Abnormal spindle microtubule assembly.	TPX2 microtubule nucleation factor.	0.935