STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ndufaf5NADH:ubiquinone oxidoreductase complex assembly factor 5. (378 aa)    
Predicted Functional Partners:
ndufs7
NADH:ubiquinone oxidoreductase core subunit S7; Belongs to the complex I 20 kDa subunit family.
    
 0.996
ndufaf3
NADH:ubiquinone oxidoreductase complex assembly factor.
    
 0.993
ndufaf6
NADH:ubiquinone oxidoreductase complex assembly factor 6.
   
 0.987
ND1
NADH-ubiquinone oxidoreductase chain 1; Belongs to the complex I subunit 1 family.
     
 0.971
ndufaf8
NADH:ubiquinone oxidoreductase complex assembly factor 8.
   
 0.946
ndufaf4
NADH:ubiquinone oxidoreductase complex assembly factor 4.
   
 
 0.928
ndufaf7
Protein arginine methyltransferase NDUFAF7; Arginine methyltransferase involved in the assembly or stability of mitochondrial NADH:ubiquinone oxidoreductase complex (complex I).
   
 
 0.927
ndufs2
NADH:ubiquinone oxidoreductase core subunit S2; Belongs to the complex I 49 kDa subunit family.
    
 0.923
xrcc2
X-ray repair cross complementing 2.
    
   0.916
rad51d
RAD51 paralog D.
    
 
 0.908
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.