STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CPSF3Cleavage and polyadenylation specific factor 3. (653 aa)    
Predicted Functional Partners:
cpsf2
Cleavage and polyadenylation specificity factor subunit 2.
   
0.998
cpsf1
Cleavage and polyadenylation specific factor 1.
   
 0.998
sympk
Symplekin.
   
 0.997
cpsf4
Cleavage and polyadenylation specific factor 4.
   
 0.997
WDR33
WD repeat domain 33.
   
 0.996
ENSPREP00000018529
FIP1 like 1b (S. cerevisiae).
   
 0.993
Pcf11
CID domain-containing protein.
   
 0.980
cstf1
Cleavage stimulation factor, 3' pre-RNA, subunit 1.
   
 0.980
cstf2
Cleavage stimulation factor, 3' pre-RNA, subunit 2.
   
 0.979
cstf3
Cleavage stimulation factor, 3' pre-RNA, subunit 3.
   
 0.964
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.