STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
supt3hSPT3 homolog, SAGA and STAGA complex component. (343 aa)    
Predicted Functional Partners:
supt7l
SPT7 like, STAGA complex gamma subunit.
    
 0.995
tada2b
Transcriptional adapter.
    
 0.994
Taf12
TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
   
 0.994
sgf29
SAGA complex associated factor 29.
    
 0.994
tada3
Transcriptional adaptor 3 (NGG1 homolog, yeast)-like.
    
 0.994
taf6l
TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor.
    
 0.993
supt20h
SPT20 homolog, SAGA complex component.
    
 0.993
taf10
TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
    
 0.993
TADA1
Transcriptional adaptor 1.
    
 0.989
LOC103459886
TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
   
 0.986
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.