STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103468075ER membrane protein complex subunit 3; Belongs to the EMC3 family. (258 aa)    
Predicted Functional Partners:
emc7
ER membrane protein complex subunit 7.
   
 0.985
emc6
ER membrane protein complex subunit 6.
   
 0.983
emc10
ER membrane protein complex subunit 10.
    
 0.983
emc8
ER membrane protein complex subunit 8.
   
 0.981
mmgt1
Membrane magnesium transporter 1.
   
 0.981
emc2
ER membrane protein complex subunit 2.
   
 0.979
emc1
ER membrane protein complex subunit 1.
    
 0.979
emc4
ER membrane protein complex subunit 4; Belongs to the EMC4 family.
   
 
 0.977
emc9
ER membrane protein complex subunit 9.
   
 0.929
dctn4
Dynactin 4.
    
 
 0.858
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.