Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
rsph10bRadial spoke head 10 homolog B. (735 aa)    
Predicted Functional Partners:
lrguk
Leucine-rich repeats and guanylate kinase domain containing.
    
 
 0.761
Rsph14
Uncharacterized protein.
   
 
 0.747
rsph9
Radial spoke head 9 homolog.
   
 
 0.634
cfap99
Cilia and flagella associated protein 99.
    
 
 0.622
ENSPREP00000027150
Uncharacterized protein.
    
 0.609
ENSPREP00000014094
NDK domain-containing protein.
    
 
 0.602
ssna1
Sjogren syndrome nuclear autoantigen 1.
      
 0.599
zswim2
Zinc finger, SWIM-type containing 2.
      
 0.597
dlec1
DLEC1 cilia and flagella associated protein.
    
 
 0.596
cfap161
Uncharacterized protein.
    
 
 0.560
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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