STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103469858Si:dkey-1k23.3; Belongs to the small heat shock protein (HSP20) family. (302 aa)    
Predicted Functional Partners:
LOC103464872
MAPK activated protein kinase 2a; Belongs to the protein kinase superfamily.
    
 0.938
MAPKAPK3
MAPK activated protein kinase 3; Belongs to the protein kinase superfamily.
    
 0.938
mapkapk5
MAPK activated protein kinase 5.
    
 0.938
LOC103465075
MAPK activated protein kinase 3; Belongs to the protein kinase superfamily.
    
 0.938
LOC103473747
Heat shock protein, alpha-crystallin-related, b15; Belongs to the small heat shock protein (HSP20) family.
  
  
 
0.902
hspb1
Heat shock protein, alpha-crystallin-related, 1; Belongs to the small heat shock protein (HSP20) family.
     
 
0.900
hspb11
Zgc:158640.
      
 0.516
rps27a
Ribosomal protein S27a.
   
 0.481
bag3
BCL2 associated athanogene 3.
   
 
 0.468
LOC103474309
EF-hand domain family, member D1.
      
 0.461
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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