STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
hspb8Heat shock protein b8; Belongs to the small heat shock protein (HSP20) family. (221 aa)    
Predicted Functional Partners:
bag3
BCL2 associated athanogene 3.
   
 
 0.997
hspb7
Heat shock protein family, member 7 (cardiovascular); Belongs to the small heat shock protein (HSP20) family.
   
 
 0.975
LOC103473747
Heat shock protein, alpha-crystallin-related, b15; Belongs to the small heat shock protein (HSP20) family.
   
 
0.763
hspb1
Heat shock protein, alpha-crystallin-related, 1; Belongs to the small heat shock protein (HSP20) family.
   
 
 0.730
Dnajb4
DnaJ heat shock protein family (Hsp40) member B4.
   
 0.658
cluh
Clustered mitochondria protein homolog; mRNA-binding protein involved in proper cytoplasmic distribution of mitochondria. Specifically binds mRNAs of nuclear- encoded mitochondrial proteins in the cytoplasm and regulates transport or translation of these transcripts close to mitochondria, playing a role in mitochondrial biogenesis; Belongs to the CLU family.
      
 0.604
vwa8
Von Willebrand factor A domain containing 8.
    
   0.601
hspb11
Zgc:158640.
      
 0.599
agl
Amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase b.
   
  
 0.598
traf3
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 
 0.590
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.