STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103477849Uncharacterized protein. (255 aa)    
Predicted Functional Partners:
lcat
Lecithin-cholesterol acyltransferase.
   
 0.896
LOC103477848
Apolipoprotein Eb.
  
0.823
apob
Apolipoprotein Ba.
   
 0.816
LOC103457447
Apolipoprotein Bb, tandem duplicate 2.
   
 0.816
ENSPREP00000010257
Uncharacterized protein.
   
 0.816
ENSPREP00000010344
Vitellogenin domain-containing protein.
   
 0.816
scarb1
Scavenger receptor class B, member 1; Belongs to the CD36 family.
    
 0.812
pltp
Phospholipid transfer protein.
   
 0.763
LOC103466227
Phospholipase A2, group XV.
   
 0.748
LOC103473017
Apolipoprotein Ea.
  
0.732
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.