STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
suds3SDS3 homolog, SIN3A corepressor complex component. (318 aa)    
Predicted Functional Partners:
arid4b
Translocase of outer mitochondrial membrane 20.
   
 0.988
Arid4a
Tudor domain-containing protein.
   
 0.980
ing1
Inhibitor of growth protein.
    
 
 0.954
sap18
Histone deacetylase complex subunit SAP18; Involved in the tethering of the SIN3 complex to core histone proteins.
     
 0.942
sap30l
Sap30-like.
   
 0.931
rbbp4
Retinoblastoma binding protein 4.
    
 0.926
RBBP7
RB binding protein 7, chromatin remodeling factor.
    
 0.926
LOC103462700
SIN3 transcription regulator family member Ab.
   
 0.909
sin3a
SIN3 transcription regulator family member Aa.
   
 0.909
sin3b
SIN3 transcription regulator family member B.
   
 0.909
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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