STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
slco4a1Solute carrier organic anion transporter family member. (773 aa)    
Predicted Functional Partners:
synj2bp
Synaptojanin 2 binding protein.
    
 
 0.566
Slc16a10
Solute carrier family 16 member 10.
   
 0.557
LOC103480134
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
   
  
 0.518
mfsd10
Major facilitator superfamily domain containing 10.
      
 0.470
SLC16A2
Solute carrier family 16 member 2.
   
 0.418
LOC103457585
Potassium voltage-gated channel, subfamily H (eag-related), member 5a.
      
 0.408
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.