STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103460623Prothymosin alpha b. (105 aa)    
Predicted Functional Partners:
rpl6
Ribosomal protein L6.
   
  
 0.970
rps15
Ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
   
    0.958
rplp1
Ribosomal protein, large, P1.
   
    0.958
rps27a
Ribosomal protein S27a.
   
    0.958
rps8
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
   
    0.958
rpl34
Ribosomal protein L34.
   
    0.958
rps6
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
    0.955
rps3
Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
   
  
 0.952
rpl13
60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family.
   
    0.948
rpl8
Ribosomal protein L8.
   
    0.944
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.