STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103477848Apolipoprotein Eb. (265 aa)    
Predicted Functional Partners:
LOC103473856
Uncharacterized protein; Belongs to the synuclein family.
    
 0.980
app
Amyloid beta (A4) precursor protein a.
    
 0.971
LOC103459816
Amyloid beta (A4) precursor protein b.
    
 0.971
LOC103477850
Uncharacterized protein.
  
0.967
LOC103477849
Uncharacterized protein.
  
0.966
apob
Apolipoprotein Ba.
   
 0.927
LOC103457447
Apolipoprotein Bb, tandem duplicate 2.
   
 0.927
ENSPREP00000010344
Vitellogenin domain-containing protein.
   
 0.927
sorl1
Sortilin-related receptor, L(DLR class) A repeats containing.
    
 0.909
apoc1
Uncharacterized protein.
   
 
 0.907
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.