STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000006666BHLH domain-containing protein. (76 aa)    
Predicted Functional Partners:
LOC103478724
Aryl hydrocarbon receptor nuclear translocator.
    
 
 0.759
arnt2
Aryl-hydrocarbon receptor nuclear translocator 2.
    
 
 0.759
ccnh
Cyclin H; Belongs to the cyclin family.
    
   0.518
otp
Orthopedia homeobox.
   
 
 0.510
trh
Pro-thyrotropin-releasing hormone; Functions as a regulator of the biosynthesis of TSH in the anterior pituitary gland and as a neurotransmitter/ neuromodulator in the central and peripheral nervous systems.
      
 0.503
ENSPREP00000002541
Agouti domain-containing protein.
      
 0.499
LOC103462945
Forkhead box R1.
    
 
 0.496
sumo1
Small ubiquitin like modifier 1.
      
 0.456
ENSPREP00000033046
Melanocortin 4 receptor.
      
 0.432
foxg1
Forkhead box G1a.
    
 
 0.410
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.