STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000006667Zebrafish testis-expressed 38. (320 aa)    
Predicted Functional Partners:
trip13
Thyroid hormone receptor interactor 13; Belongs to the AAA ATPase family.
   
 
 0.888
dmc1
Meiotic recombination protein; May participate in meiotic recombination, specifically in homologous strand assimilation, which is required for the resolution of meiotic double-strand breaks; Belongs to the RecA family. DMC1 subfamily.
   
 
 0.819
rad51c
RAD51 paralog C.
   
 
 0.691
rec8
REC8 meiotic recombination protein b.
   
 
 0.634
sycp3
Synaptonemal complex protein 3.
   
  
 0.608
spo11
SPO11 initiator of meiotic double stranded breaks.
   
  
 0.604
Syce3
Uncharacterized protein.
      
 0.600
rad51
RAD51 recombinase.
   
 
 0.594
LOC103464578
Synaptonemal complex central element protein 2.
      
 0.593
Mei1
Uncharacterized protein.
      
 0.593
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: medium (56%) [HD]