STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
celsr2Cadherin, EGF LAG seven-pass G-type receptor 2; Belongs to the G-protein coupled receptor 2 family. (3043 aa)    
Predicted Functional Partners:
nhsl1
NHS-like 1b.
      
 0.560
celsr3
Cadherin, EGF LAG seven-pass G-type receptor 3; Belongs to the G-protein coupled receptor 2 family.
  
   
0.500
ajap1
Adherens junctions associated protein 1.
      
 0.495
VANGL2
VANGL planar cell polarity protein 2.
    
 0.433
LOC103480354
Vang-like protein.
    
 0.433
VANGL1
Vang-like protein.
    
 0.432
PRICKLE1
Prickle homolog 1a.
   
 0.430
LOC103459444
Prickle homolog 1b.
   
 0.426
sirt1
Sirtuin 1.
      
 0.408
LOC103459411
Vang-like protein.
    
 0.403
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.