STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103458130BHLH domain-containing protein. (3008 aa)    
Predicted Functional Partners:
LOC103457059
THAP-type domain-containing protein.
    
 0.958
ENSPREP00000015321
Myc associated factor X.
    
 0.923
MAX
MYC associated factor X.
    
 0.923
ENSPREP00000023487
Uncharacterized protein.
     
 
0.900
pcgf1
Polycomb group ring finger 1.
    
 0.843
pcgf6
Polycomb group ring finger 6.
    
 0.843
LOC103482174
Mbt domain containing 1.
   
 0.814
LOC103469014
FCS-type domain-containing protein.
   
 0.814
ENSPREP00000030799
L3MBTL histone methyl-lysine binding protein 2.
   
 0.814
ENSPREP00000030823
THAP-type domain-containing protein.
   
 0.814
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.