STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
zc3h15Zinc finger CCCH-type containing 15. (429 aa)    
Predicted Functional Partners:
drg1
Developmentally regulated GTP binding protein 1.
   
 
 0.996
drg2
Developmentally regulated GTP binding protein 2.
   
 
 0.959
fau
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
   0.878
rps15
Ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
   
   0.855
rpl23a
Ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family.
   
   0.855
rps12
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
   
   0.845
rack1
Receptor for activated C kinase 1.
   
   0.834
RPS20
Ribosomal protein S20.
   
   0.790
rwdd1
RWD domain containing 1.
   
 
 0.786
rps13
Ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.
   
   0.781
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.