STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
zc3h15Zinc finger CCCH-type containing 15. (429 aa)    
Predicted Functional Partners:
drg1
Developmentally regulated GTP binding protein 1.
   
 0.999
drg2
Developmentally regulated GTP binding protein 2.
   
 0.943
dnajc2
DnaJ (Hsp40) homolog, subfamily C, member 2.
   
 
 0.935
ssb
Small RNA binding exonuclease protection factor La.
   
    0.854
thoc3
THO complex 3.
    
 
 0.792
rwdd1
RWD domain containing 1.
   
 
 0.780
usp10
Ubiquitin carboxyl-terminal hydrolase.
   
   0.778
bckdhb
Branched chain keto acid dehydrogenase E1 subunit beta.
 
      0.767
nudt13
Nudix (nucleoside diphosphate linked moiety X)-type motif 13.
      
 0.758
thoc7
THO complex 7.
   
   0.758
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.