STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103465714Pleckstrin homology domain containing, family A member 7a. (1385 aa)    
Predicted Functional Partners:
ctnnb1
Catenin (cadherin-associated protein), beta 1.
    
 0.732
ywhae
Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide 1; Belongs to the 14-3-3 family.
    
 0.587
mysm1
Myb-like, SWIRM and MPN domains 1.
   
 0.557
rps27a
Ribosomal protein S27a.
    
  0.556
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.547
lats2
Large tumor suppressor kinase 2.
   
 0.530
lats1
Large tumor suppressor kinase 1.
   
 0.530
ggnbp2
Gametogenetin binding protein 2.
    
 
 0.520
LOC103481202
Tetraspanin.
    
 
 0.520
LOC103456598
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
 0.504
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.