STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
taok3TAO kinase 3a. (950 aa)    
Predicted Functional Partners:
LOC103481589
Mitogen-activated protein kinase kinase 6.
    
0.926
LOC103475599
TAO kinase 1b.
  
  
 
0.901
taok2
TAO kinase 2b.
  
  
 
0.901
yap1
Yes-associated protein 1.
    
 
 0.653
LOC103457914
WD repeat domain 20b.
     
 0.579
cdc20
Cell division cycle 20 homolog.
     
  0.564
nudc
NudC nuclear distribution protein.
     
  0.564
mapre1
Microtubule-associated protein, RP/EB family, member 1b.
    
 0.555
wdr20
WD repeat domain 20a.
     
 0.550
IGFBP3
Insulin like growth factor binding protein 3.
    
 0.546
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.