STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
wdr35WD repeat-containing protein 35. (1173 aa)    
Predicted Functional Partners:
IFT122
Intraflagellar transport 122.
  
 0.998
ift140
Intraflagellar transport 140 homolog (Chlamydomonas).
    
 0.996
wdr19
WD repeat domain 19.
  
 0.994
ttc21b
Tetratricopeptide repeat domain 21B.
   
 0.991
IFT43
Intraflagellar transport 43.
    
 0.990
ift80
Intraflagellar transport 80 homolog (Chlamydomonas).
  
 0.921
cluap1
Clusterin associated protein 1.
  
  
 0.850
ttc26
Tetratricopeptide repeat domain 26.
  
 
 0.849
ift88
Intraflagellar transport 88 homolog.
  
  
 0.835
ift81
Intraflagellar transport 81 homolog.
     
 0.833
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.