Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
wdr35WD repeat-containing protein 35. (1173 aa)    
Predicted Functional Partners:
wdr19
WD repeat domain 19.
  
 0.999
ttc21b
Tetratricopeptide repeat domain 21B.
   
 0.999
IFT122
Intraflagellar transport 122.
  
 0.999
ift140
Intraflagellar transport 140 homolog (Chlamydomonas).
   
 0.999
IFT43
Intraflagellar transport 43.
    
 0.998
ift80
Intraflagellar transport 80 homolog (Chlamydomonas).
  
 0.972
ift81
Intraflagellar transport 81 homolog.
   
 0.972
ift57
Intraflagellar transport 57 homolog (Chlamydomonas).
    
 0.958
ift172
Intraflagellar transport 172.
   
 0.956
cluap1
Clusterin associated protein 1.
  
 
 0.955
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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