STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103476580Dual specificity phosphatase 19b. (202 aa)    
Predicted Functional Partners:
map2k7
Mitogen-activated protein kinase kinase 7.
    
 
 0.717
nol9
Nucleolar protein 9.
   
  
 0.680
alas1
5-aminolevulinate synthase.
   
   0.566
ENSPREP00000029241
Preseq_ALAS domain-containing protein.
   
   0.566
LOC103468004
5-aminolevulinate synthase.
   
   0.566
tbccd1
TBCC domain containing 1.
      
 0.565
fkbp9
Peptidylprolyl isomerase.
   
 
 0.553
paqr3
Progestin and adipoQ receptor family member IIIa.
      
 0.545
LOC103473559
Progestin and adipoQ receptor family member IIIb.
      
 0.545
gins1
GINS complex subunit 1 (Psf1 homolog).
   
 
 0.519
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.