STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LMOD3Leiomodin 3. (539 aa)    
Predicted Functional Partners:
neb
Nebulin.
   
 0.673
nrap
Nebulin-related anchoring protein.
   
 0.639
csrp3
Cysteine and glycine-rich protein 3 (cardiac LIM protein).
   
  
 0.630
acot13
Acyl-CoA thioesterase 13.
      
 0.605
LOC103461533
Myosin, light chain 1, alkali; skeletal, fast.
   
 
 0.566
ENSPREP00000018153
Troponin T type 1 (skeletal, slow).
   
 
 0.552
tnnt1
Uncharacterized protein.
   
 
 0.552
Mb
Myoglobin; Serves as a reserve supply of oxygen and facilitates the movement of oxygen within muscles.
   
 
 0.541
Cfl2
Cofilin 2 (muscle); Belongs to the actin-binding proteins ADF family.
      
 0.503
ENSPREP00000007154
Myozenin 2b.
   
 
 0.501
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.