Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
drc7Uncharacterized protein. (720 aa)    
Predicted Functional Partners:
ENSPREP00000015281
NYD-SP28 domain-containing protein.
   
 
 0.957
dnali1
Dynein, axonemal, light intermediate chain 1.
  
 
 0.953
ttc25
Tetratricopeptide repeat domain 25.
   
 
 0.952
ENSPREP00000019710
Uncharacterized protein.
   
 
 0.933
efhc1
EF-hand domain (C-terminal) containing 1.
  
 
 0.926
cfap161
Uncharacterized protein.
   
 
 0.920
LOC103466357
DUF4201 domain-containing protein.
    
 
 0.917
drc3
Dynein regulatory complex subunit 3.
   
 
 0.907
cfap45
Cilia and flagella associated protein 45.
   
 
 0.905
ccdc96
DUF4201 domain-containing protein.
    
 
 0.905
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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