STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
igbp1Immunoglobulin (CD79A) binding protein 1. (358 aa)    
Predicted Functional Partners:
ppp2ca
Serine/threonine-protein phosphatase.
    
 0.985
LOC103471193
Serine/threonine-protein phosphatase.
    
 0.985
ppp4c
Serine/threonine-protein phosphatase.
    
 
 0.983
tiprl
TIP41, TOR signaling pathway regulator-like (S. cerevisiae).
    
 
 0.979
rptor
Regulatory associated protein of MTOR, complex 1.
    
 0.978
Mtor
Serine/threonine-protein kinase TOR.
   
 0.977
LOC103474066
Serine/threonine-protein phosphatase.
   
 
 0.952
PPP6C
Serine/threonine-protein phosphatase.
   
 
 0.952
cct2
Chaperonin containing TCP1, subunit 2 (beta).
    
 
 0.926
cct4
T-complex protein 1 subunit delta.
    
 
 0.909
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.